Transcript: ENST00000486022.1 LSMEM1-005

Description

leucine-rich single-pass membrane protein 1 [Source:HGNC Symbol;Acc:22036]

Gene Synonyms

C7orf53, FLJ39575

Location

Chromosome 7: 112,126,178-112,130,022 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1667 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSG00000181016.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312849.4	LSMEM1-001	1870	131aa	ENSP00000323304.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5756	Q8N8F7	NM_182597.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439068.2	LSMEM1-003	730	131aa	ENSP00000389278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5756	Q8N8F7	NM_001134468.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429049.1	LSMEM1-201	541	59aa	ENSP00000415047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N8F7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455302.1	LSMEM1-002	819	59aa	ENSP00000412823.1	Nonsense mediated decay		Q8N8F7	-	-
ENST00000486022.1	LSMEM1-005	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471030.1	LSMEM1-004	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 604 bps,

Version

ENST00000486022.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338720 (version 1)

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Transcript: ENST00000486022.1 LSMEM1-005

Summary