Transcript: ENST00000455302.1 LSMEM1-002

Description

leucine-rich single-pass membrane protein 1 [Source:HGNC Symbol;Acc:22036]

Gene Synonyms

C7orf53, FLJ39575

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 3771 variant alleles and maps to 236 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312849.4	LSMEM1-001	1870	131aa	ENSP00000323304.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5756	Q8N8F7	NM_182597.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439068.2	LSMEM1-003	730	131aa	ENSP00000389278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5756	Q8N8F7	NM_001134468.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429049.1	LSMEM1-201	541	59aa	ENSP00000415047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N8F7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455302.1	LSMEM1-002	819	59aa	ENSP00000412823.1	Nonsense mediated decay		Q8N8F7	-	-
ENST00000486022.1	LSMEM1-005	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471030.1	LSMEM1-004	483	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 819 bps, Translation length: 59 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N8F7

Version

ENST00000455302.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338717 (version 1)