Description
autophagy related 4B, cysteine peptidase [Source:HGNC Symbol;Acc:20790]
Gene Synonyms
APG4B, AUTL1, DKFZp586D1822, KIAA0943
Location
Chromosome 2: 242,592,882-242,606,184 forward strand.
About this transcript
This transcript has 5 exons, is annotated with 4 domains and features, is associated with 7245 variant alleles and maps to 170 oligo probes.
Gene
This transcript is a product of gene ENSG00000168397.12 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000404914.3 | ATG4B-002 | 2878 | 393aa | ENSP00000384259.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46564 | C9J1C1 C9J3C0 C9JVD5 F8WD71 Q9Y4P1 | NM_178326.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000405546.3 | ATG4B-001 | 3294 | 380aa | ENSP00000383964.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46565 | C9J1C1 C9J3C0 C9JVD5 Q9Y4P1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000402096.1 | ATG4B-006 | 1685 | 331aa | ENSP00000384661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 Q9Y4P1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000474739.2 | ATG4B-202 | 1654 | 379aa | ENSP00000442378.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 F5H7P2 F8WD71 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000396411.3 | ATG4B-201 | 1384 | 319aa | ENSP00000379692.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 F8WD71 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000425239.1 | ATG4B-023 | 807 | 266aa | ENSP00000409895.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9JQ72 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000400771.3 | ATG4B-025 | 663 | 219aa | ENSP00000383582.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JIK8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000430617.2 | ATG4B-020 | 623 | 105aa | ENSP00000407389.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000428861.1 | ATG4B-027 | 580 | 193aa | ENSP00000404783.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2A6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000419606.1 | ATG4B-015 | 553 | 66aa | ENSP00000400050.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000429899.1 | ATG4B-026 | 524 | 147aa | ENSP00000410526.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000344376.5 | ATG4B-005 | 1566 | 76aa | ENSP00000344960.5 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000400772.2 | ATG4B-011 | 625 | 88aa | ENSP00000383583.2 | Nonsense mediated decay | F2Z2K8 | - | - | |
ENST00000415107.1 | ATG4B-022 | 356 | 88aa | ENSP00000390597.1 | Nonsense mediated decay | F2Z2K8 | - | - | |
ENST00000491867.1 | ATG4B-010 | 435 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000482507.1 | ATG4B-004 | 2414 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000494465.1 | ATG4B-003 | 2365 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000475693.1 | ATG4B-008 | 2237 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000483778.1 | ATG4B-012 | 1103 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000493618.1 | ATG4B-024 | 899 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000460211.1 | ATG4B-028 | 871 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000494132.1 | ATG4B-029 | 828 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000475195.1 | ATG4B-014 | 762 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000468018.1 | ATG4B-021 | 721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000465399.1 | ATG4B-016 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000479554.1 | ATG4B-013 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000479941.1 | ATG4B-030 | 374 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |