Transcript: ENST00000461640.1 TMEM18-006

Description

transmembrane protein 18 [Source:HGNC Symbol;Acc:25257]

Gene Synonyms

DKFZp434C1714

Location

Chromosome 2: 675,609-676,787 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 703 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSG00000151353.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281017.3	TMEM18-001	2762	140aa	ENSP00000281017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33141	Q96B42	NM_152834.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355654.2	TMEM18-201	775	127aa	ENSP00000347874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96B42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405941.3	TMEM18-003	654	143aa	ENSP00000384347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432667.1	TMEM18-002	2572	66aa	ENSP00000390474.1	Nonsense mediated decay		F8WBA6	-	-
ENST00000418447.1	TMEM18-004	623	59aa	ENSP00000408658.1	Nonsense mediated decay		F8WEA7	-	-
ENST00000477202.1	TMEM18-005	1767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497508.1	TMEM18-007	1706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461640.1	TMEM18-006	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 844 bps,

Version

ENST00000461640.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322432 (version 1)

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Transcript: ENST00000461640.1 TMEM18-006

Summary