Transcript: ENST00000514547.1 TRMT10A-004

Description

tRNA methyltransferase 10 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:28403]

Gene Synonyms

HEL-S-88, MGC27034, RG9MTD2, TRM10

Location

Chromosome 4: 100,474,988-100,484,880 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 4468 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000145331.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273962.3	TRMT10A-003	3694	339aa	ENSP00000273962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_152292.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394877.3	TRMT10A-001	3516	339aa	ENSP00000378343.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_001134666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394876.2	TRMT10A-002	1638	339aa	ENSP00000378342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455368.2	TRMT10A-005	802	205aa	ENSP00000397551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514547.1	TRMT10A-004	788	199aa	ENSP00000423628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507394.1	TRMT10A-006	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515831.1	TRMT10A-007	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 788 bps, Translation length: 199 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000514547.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365444 (version 1)

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Transcript: ENST00000514547.1 TRMT10A-004

Summary