Transcript: ENST00000480663.1 SLC26A8-007

Description

solute carrier family 26 (anion exchanger), member 8 [Source:HGNC Symbol;Acc:14468]

Gene Synonyms

SPGF3, TAT1

Location

Chromosome 6: 35,980,026-35,992,645 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 5021 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSG00000112053.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000490799.1	SLC26A8-001	3653	970aa	ENSP00000417638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_052961.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355574.2	SLC26A8-005	3463	970aa	ENSP00000347778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4813	Q96RN1	NM_001193476.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394602.2	SLC26A8-006	3144	865aa	ENSP00000378100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4814	Q96RN1	NM_138718.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480663.1	SLC26A8-007	582	190aa	ENSP00000420488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465492.1	SLC26A8-002	2104	320aa	ENSP00000418107.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469847.1	SLC26A8-008	740	184aa	ENSP00000419700.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486155.1	SLC26A8-004	2989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466805.1	SLC26A8-003	2876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 582 bps, Translation length: 190 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000480663.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356010 (version 1)

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Transcript: ENST00000480663.1 SLC26A8-007

Summary