Transcript: ENST00000464291.1 GLI3-006

Description

GLI family zinc finger 3 [Source:HGNC Symbol;Acc:4319]

Gene Synonyms

ACLS, GCPS, GLI3-190, GLI3FL, PAP-A, PAPA, PAPA1, PAPB, PHS, PPDIV

Location

Chromosome 7: 42,012,039-42,017,521 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2207 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSG00000106571.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395925.3	GLI3-001	8208	1580aa	ENSP00000379258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5465	C9J9N4 P10071	NM_000168.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448703.1	GLI3-005	653	180aa	ENSP00000406135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9N4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437480.1	GLI3-004	451	96aa	ENSP00000407963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WEV4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479210.1	GLI3-002	4968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000428534.1	GLI3-003	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464291.1	GLI3-006	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 553 bps,

Version

ENST00000464291.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338492 (version 1)

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Transcript: ENST00000464291.1 GLI3-006

Summary