Transcript: ENST00000437480.1 GLI3-004

Description

GLI family zinc finger 3 [Source:HGNC Symbol;Acc:4319]

Gene Synonyms

ACLS, GCPS, GLI3-190, GLI3FL, PAP-A, PAPA, PAPA1, PAPB, PHS, PPDIV

Location

About this transcript

This transcript has 3 exons, is associated with 28836 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395925.3	GLI3-001	8208	1580aa	ENSP00000379258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5465	C9J9N4 P10071	NM_000168.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448703.1	GLI3-005	653	180aa	ENSP00000406135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9N4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437480.1	GLI3-004	451	96aa	ENSP00000407963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WEV4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479210.1	GLI3-002	4968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000428534.1	GLI3-003	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464291.1	GLI3-006	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 451 bps, Translation length: 96 residues

Version

ENST00000437480.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338490 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.