Gene: PRPF3 ENSG00000117360

Description

pre-mRNA processing factor 3 [Source:HGNC Symbol;Acc:17348]

Gene Synonyms

HPRP3, HPRP3P, PRP3, Prp3, Prp3p, RP18, SNRNP90, hPrp3

Location

Chromosome 1: 150,293,925-150,325,671 forward strand.

GRCh37:CM000663.1

View alleles of this gene on alternative sequences

About this gene

This gene has 9 transcripts (splice variants), 1 gene allele and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324862.6	PRPF3-001	2433	683aa	ENSP00000315379.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS951	O43395	NM_004698.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414970.2	PRPF3-201	2146	634aa	ENSP00000387844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543398.1	PRPF3-202	1889	281aa	ENSP00000445421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467329.1	PRPF3-007	2595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467514.1	PRPF3-003	1097	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496202.1	PRPF3-002	1082	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476970.1	PRPF3-004	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470824.1	PRPF3-005	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493553.1	PRPF3-006	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Variant image

Retirement notice

Human only - retirement of this view

As of Ensembl release 93 this view will no longer be available for human, because we feel that the density of known human genetic variation is too great for the display to be informative in its current form.

Other species will not be affected, as they have less variation data.

For more information about the decision and on how to find variation data for a gene, please see our blog post.

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Gene: PRPF3 ENSG00000117360

Variant image

Retirement notice

Human only - retirement of this view