Transcript: ENST00000324862.6 PRPF3-001

Description

pre-mRNA processing factor 3 [Source:HGNC Symbol;Acc:17348]

Gene Synonyms

HPRP3, HPRP3P, PRP3, Prp3, Prp3p, RP18, SNRNP90, hPrp3

Location

Chromosome 1: 150,293,925-150,325,671 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 16 domains and features, is associated with 14743 variant alleles and maps to 598 oligo probes.

Gene

This transcript is a product of gene ENSG00000117360.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324862.6	PRPF3-001	2433	683aa	ENSP00000315379.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS951	O43395	NM_004698.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414970.2	PRPF3-201	2146	634aa	ENSP00000387844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543398.1	PRPF3-202	1889	281aa	ENSP00000445421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSY9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467329.1	PRPF3-007	2595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467514.1	PRPF3-003	1097	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496202.1	PRPF3-002	1082	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476970.1	PRPF3-004	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470824.1	PRPF3-005	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493553.1	PRPF3-006	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,433 bps, Translation length: 683 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43395

CCDS

This transcript is a member of the Human CCDS set: CCDS951

Version

ENST00000324862.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000035836 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000324862.6 PRPF3-001

Summary