Description
Vac14 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25507]
Gene Synonyms
ArPIKfyve, FLJ10305, TAX1BP2, TRX
Location
Chromosome 16: 70,721,342-70,835,064 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 12 transcripts (splice variants) and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000261776.5 | VAC14-001 | 3099 | 782aa | ENSP00000261776.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10896 | B3KSM8 Q08AM6 Q9NTB8 | NM_018052.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000536184.2 | VAC14-005 | 2161 | 214aa | ENSP00000439284.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KSM8 Q9NTB8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000566416.1 | VAC14-010 | 780 | 260aa | ENSP00000455731.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000567648.1 | VAC14-012 | 702 | 17aa | ENSP00000463485.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000568548.1 | VAC14-003 | 2945 | 40aa | ENSP00000454650.1 | Nonsense mediated decay | H3BN23 | - | - | |
| ENST00000568886.1 | VAC14-002 | 2151 | 201aa | ENSP00000457809.1 | Nonsense mediated decay | H3BUU8 | - | - | |
| ENST00000571759.1 | VAC14-013 | 3609 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000561879.1 | VAC14-008 | 432 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000566655.1 | VAC14-007 | 1391 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000564685.1 | VAC14-006 | 892 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000563662.1 | VAC14-009 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000564512.1 | VAC14-011 | 515 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
