Gene: SLC6A20 ENSG00000163817

Description

solute carrier family 6 (proline IMINO transporter), member 20 [Source:HGNC Symbol;Acc:30927]

Gene Synonyms

SIT1, XT3, XTRP3, Xtrp3

Location

Chromosome 3: 45,796,942-45,838,027 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 7 transcripts (splice variants), 5 paralogues and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358525.4	SLC6A20-001	5423	592aa	ENSP00000346298.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43077	Q9NP91	NM_020208.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353278.4	SLC6A20-002	5247	555aa	ENSP00000296133.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2730	Q9NP91	NM_022405.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456124.2	SLC6A20-201	2662	547aa	ENSP00000404310.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZLW4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413781.1	SLC6A20-007	910	264aa	ENSP00000395506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIN6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493980.1	SLC6A20-005	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470226.1	SLC6A20-006	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473146.1	SLC6A20-004	2441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SLC6A20 ENSG00000163817

Summary