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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDLIM4 ENSG00000131435

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Description

PDZ and LIM domain 4 [Source:HGNC Symbol;Acc:16501]

Gene Synonyms

RIL

Location

Chromosome 5: 131,593,364-131,609,147 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 7 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253754.3	PDLIM4-001	2282	330aa	ENSP00000253754.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4152	C9J542 P50479	NM_003687.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379018.3	PDLIM4-002	1006	246aa	ENSP00000368303.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47261	C9J542 P50479	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418373.1	PDLIM4-004	538	121aa	ENSP00000411753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J542	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484620.1	PDLIM4-005	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474421.1	PDLIM4-003	1084	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462597.1	PDLIM4-006	767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463615.1	PDLIM4-007	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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