Description
collagen, type XXVII, alpha 1 [Source:HGNC Symbol;Acc:22986]
Gene Synonyms
FLJ11895, KIAA1870, MGC11337
Location
Chromosome 9: 116,917,840-117,074,791 forward strand.
GRCh37:CM000671.1
About this gene
This gene has 8 transcripts (splice variants), 17 paralogues and is associated with 3 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000356083.3 | COL27A1-001 | 7790 | 1860aa | ENSP00000348385.3 | Protein coding | CCDS6802 | Q8IZC6 | NM_032888.2 | GENCODE basic, |
ENST00000451716.1 | COL27A1-004 | 2865 | 714aa | ENSP00000391328.1 | Protein coding | Q5T1U7 | - | CDS 5' incomplete, | |
ENST00000494090.2 | COL27A1-002 | 5329 | 485aa | ENSP00000432928.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000477421.2 | COL27A1-006 | 3991 | No protein | - | Processed transcript | - | - | - | |
ENST00000468565.1 | COL27A1-003 | 1946 | No protein | - | Processed transcript | - | - | - | |
ENST00000490831.1 | COL27A1-008 | 666 | No protein | - | Processed transcript | - | - | - | |
ENST00000494780.1 | COL27A1-007 | 514 | No protein | - | Processed transcript | - | - | - | |
ENST00000485397.1 | COL27A1-005 | 463 | No protein | - | Retained intron | - | - | - |