Description
AF4/FMR2 family, member 1 [Source:HGNC Symbol;Acc:7135]
Gene Synonyms
AF-4, AF4, FEL, MLLT2, PBM1
Location
Chromosome 4: 87,856,154-88,062,206 forward strand.
GRCh37:CM000666.1
About this gene
This gene has 11 transcripts (splice variants), 3 paralogues and is associated with 63 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000395146.4 | AFF1-201 | 9285 | 1218aa | ENSP00000378578.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54775 | D6RAU0 D6RIZ5 F5GXF9 P51825 Q712L1 | NM_001166693.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000307808.6 | AFF1-001 | 9390 | 1210aa | ENSP00000305689.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3616 | D6RAU0 D6RIZ5 P51825 Q14C88 Q712L1 | NM_005935.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000544085.1 | AFF1-202 | 3164 | 849aa | ENSP00000440843.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAU0 F5GXF9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000507468.1 | AFF1-007 | 1486 | 406aa | ENSP00000427593.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIZ5 E7ETI4 Q05D98 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503477.1 | AFF1-008 | 1478 | 417aa | ENSP00000424483.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DXZ8 D6RIZ5 E7EMC5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000511722.1 | AFF1-003 | 638 | 137aa | ENSP00000424766.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAU0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514970.1 | AFF1-004 | 582 | 194aa | ENSP00000424881.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAU0 H0Y9S4 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000511442.1 | AFF1-005 | 463 | 52aa | ENSP00000425755.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIZ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000511996.1 | AFF1-009 | 480 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504956.1 | AFF1-002 | 1668 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000503369.1 | AFF1-006 | 598 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
