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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASKIN1 ENSG00000167971

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Description

CASK interacting protein 1 [Source:HGNC Symbol;Acc:20879]

Gene Synonyms

ANKS5A, KIAA1306

Location

Chromosome 16: 2,227,184-2,246,526 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 3 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343516.6	CASKIN1-001	5756	1431aa	ENSP00000345436.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42103	D3DU87 Q8WXD9	NM_020764.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564289.1	CASKIN1-004	193	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562055.1	CASKIN1-003	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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