Description
chromosome 10 open reading frame 90 [Source:HGNC Symbol;Acc:26563]
Gene Synonyms
FATS, FLJ32938, bA422P15.2
Location
Chromosome 10: 128,113,566-128,359,079 reverse strand.
GRCh37:CM000672.1
About this gene
This gene has 11 transcripts (splice variants), 193 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000284694.7 | C10orf90-201 | 3076 | 699aa | ENSP00000284694.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31310 | Q5T025 Q96M02 S4R3N7 | NM_001004298.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000356858.3 | C10orf90-001 | 2995 | 660aa | ENSP00000349318.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3N7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000454341.1 | C10orf90-203 | 2785 | 602aa | ENSP00000398786.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q96M02 S4R3N7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544758.1 | C10orf90-204 | 2720 | 796aa | ENSP00000444369.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZL2 Q5T025 S4R3N7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000432642.1 | C10orf90-003 | 2107 | 662aa | ENSP00000405995.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3N7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000424927.1 | C10orf90-004 | 1595 | 242aa | ENSP00000411609.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000392694.1 | C10orf90-202 | 1414 | 383aa | ENSP00000376459.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T024 S4R3N7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000488181.1 | C10orf90-007 | 1025 | 209aa | ENSP00000474558.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R3N7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000480379.1 | C10orf90-005 | 1012 | 103aa | ENSP00000474753.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q96M02 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000463082.1 | C10orf90-006 | 566 | 39aa | ENSP00000474615.1 | Nonsense mediated decay | S4R3Q7 | - | - | |
| ENST00000368674.1 | C10orf90-002 | 2035 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
