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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VAX1 ENSG00000148704

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Description

ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:12660]

Gene Synonyms

MCOPS11

Location

Chromosome 10: 118,888,032-118,897,812 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 2 transcripts (splice variants), 6 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369206.5	VAX1-001	1723	334aa	ENSP00000358207.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44483	Q5SQQ9	NM_001112704.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277905.2	VAX1-002	4494	186aa	ENSP00000277905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7597	Q5SQQ9	NM_199131.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

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Summary

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