Transcript: ENST00000277905.2 VAX1-002

Description

ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:12660]

Gene Synonyms

MCOPS11

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 4975 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000277905.2	VAX1-002	4494	186aa	ENSP00000277905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7597	Q5SQQ9	NM_199131.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369206.5	VAX1-001	1723	334aa	ENSP00000358207.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44483	Q5SQQ9	NM_001112704.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,494 bps, Translation length: 186 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SQQ9

CCDS

This transcript is a member of the Human CCDS set: CCDS7597

Version

ENST00000277905.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000280394 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.