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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
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ID History
- Gene history

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Gene: VPS54 ENSG00000143952

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Description

vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18652]

Gene Synonyms

HCC8, SLP-8p, VPS54L, WR, hVps54L

Location

Chromosome 2: 64,119,280-64,246,206 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409558.4	VPS54-002	4337	965aa	ENSP00000386980.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46302	Q9P1Q0	NM_016516.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354504.3	VPS54-003	3594	824aa	ENSP00000346499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P1Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272322.4	VPS54-001	3463	977aa	ENSP00000272322.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33208	Q9P1Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416400.1	VPS54-004	1277	81aa	ENSP00000414725.2	Nonsense mediated decay		Q9P1Q0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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