Description
structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:29090]
Gene Synonyms
KIAA0650
Location
Chromosome 18: 2,655,737-2,805,015 forward strand.
GRCh37:CM000680.1
About this gene
This gene has 14 transcripts (splice variants) and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000320876.6 | SMCHD1-001 | 8821 | 2005aa | ENSP00000326603.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45822 | A6NHR9 | NM_015295.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000261598.8 | SMCHD1-201 | 5943 | 1917aa | ENSP00000261598.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NHR9 J3KTL8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000583800.1 | SMCHD1-015 | 865 | 48aa | ENSP00000463036.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000577880.1 | SMCHD1-006 | 4951 | 1388aa | ENSP00000463049.1 | Nonsense mediated decay | J3KTL8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000584897.1 | SMCHD1-007 | 4143 | 150aa | ENSP00000464684.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585229.1 | SMCHD1-004 | 555 | 49aa | ENSP00000462050.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000609587.1 | SMCHD1-016 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000581383.1 | SMCHD1-010 | 806 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583344.1 | SMCHD1-003 | 738 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000581631.1 | SMCHD1-014 | 729 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583441.1 | SMCHD1-008 | 657 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000581711.1 | SMCHD1-013 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577300.1 | SMCHD1-012 | 506 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000581226.1 | SMCHD1-005 | 459 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
