Transcript: ENST00000261598.8 SMCHD1-201

Description

structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:29090]

Gene Synonyms

KIAA0650

Location

Chromosome 18: 2,655,886-2,784,877 forward strand.

About this transcript

This transcript has 46 exons, is annotated with 14 domains and features, is associated with 58574 variant alleles and maps to 903 oligo probes.

Gene

This transcript is a product of gene ENSG00000101596.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320876.6	SMCHD1-001	8821	2005aa	ENSP00000326603.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45822	A6NHR9	NM_015295.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261598.8	SMCHD1-201	5943	1917aa	ENSP00000261598.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NHR9 J3KTL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583800.1	SMCHD1-015	865	48aa	ENSP00000463036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000577880.1	SMCHD1-006	4951	1388aa	ENSP00000463049.1	Nonsense mediated decay		J3KTL8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000584897.1	SMCHD1-007	4143	150aa	ENSP00000464684.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585229.1	SMCHD1-004	555	49aa	ENSP00000462050.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609587.1	SMCHD1-016	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581383.1	SMCHD1-010	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583344.1	SMCHD1-003	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581631.1	SMCHD1-014	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583441.1	SMCHD1-008	657	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581711.1	SMCHD1-013	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577300.1	SMCHD1-012	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581226.1	SMCHD1-005	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 46, Coding exons: 46, Transcript length: 5,943 bps, Translation length: 1,917 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NHR9

Version

ENST00000261598.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261598.8 SMCHD1-201

Summary