Description
topoisomerase (DNA) III beta [Source:HGNC Symbol;Acc:11993]
Gene Synonyms
TOP3B1
Location
Chromosome 22: 22,311,397-22,337,213 reverse strand.
GRCh37:CM000684.1
About this gene
This gene has 18 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000398793.2 | TOP3B-003 | 3107 | 862aa | ENSP00000381773.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13797 | C9J9X4 C9JEI7 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 O95985 | NM_003935.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000457270.1 | TOP3B-006 | 2956 | 525aa | ENSP00000408282.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KU89 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000357179.5 | TOP3B-001 | 2863 | 862aa | ENSP00000349705.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13797 | C9J9X4 C9JEI7 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 O95985 | NM_001282113.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000413067.2 | TOP3B-201 | 2033 | 282aa | ENSP00000393118.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EWY2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000424393.1 | TOP3B-012 | 824 | 246aa | ENSP00000390977.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J9X4 C9JEI7 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000434517.1 | TOP3B-008 | 736 | 21aa | ENSP00000390824.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430142.1 | TOP3B-007 | 582 | 121aa | ENSP00000414538.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J9X4 C9JEQ1 C9JHR0 C9JKE2 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437103.1 | TOP3B-010 | 571 | 42aa | ENSP00000387554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000456075.1 | TOP3B-009 | 561 | 61aa | ENSP00000391857.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J9X4 C9JEQ1 C9JHR0 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437929.1 | TOP3B-013 | 550 | 122aa | ENSP00000402622.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J9X4 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449704.1 | TOP3B-011 | 543 | 60aa | ENSP00000404600.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEQ1 C9JHR0 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442653.1 | TOP3B-014 | 400 | 46aa | ENSP00000390209.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JHR0 C9JTQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444502.1 | TOP3B-002 | 4163 | 129aa | ENSP00000392480.1 | Nonsense mediated decay | C9J9X4 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 F2Z2A5 | - | - | |
| ENST00000457179.1 | TOP3B-004 | 3061 | 129aa | ENSP00000397221.1 | Nonsense mediated decay | C9J9X4 C9JEQ1 C9JHR0 C9JKE2 C9JT00 C9JTQ7 F2Z2A5 | - | - | |
| ENST00000436282.1 | TOP3B-005 | 2890 | 168aa | ENSP00000416451.1 | Nonsense mediated decay | H7C4B0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000489581.1 | TOP3B-015 | 789 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487485.1 | TOP3B-016 | 725 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470338.1 | TOP3B-017 | 624 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
