Description
actin binding LIM protein 1 [Source:HGNC Symbol;Acc:78]
Gene Synonyms
ABLIM, KIAA0059, LIMAB1, LIMATIN, abLIM-1, limatin
Location
Chromosome 10: 116,190,872-116,444,762 reverse strand.
GRCh37:CM000672.1
About this gene
This gene has 14 transcripts (splice variants) and 10 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000277895.5 | ABLIM1-001 | 2657 | 778aa | ENSP00000277895.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7590 | O14639 | NM_002313.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000533213.2 | ABLIM1-203 | 7606 | 718aa | ENSP00000433629.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W8M4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000369252.4 | ABLIM1-201 | 7606 | 718aa | ENSP00000358256.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31288 | O14639 | NM_001003408.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392952.3 | ABLIM1-009 | 6841 | 455aa | ENSP00000376679.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31289 | O14639 | NM_006720.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000369266.3 | ABLIM1-202 | 6836 | 455aa | ENSP00000358270.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QSX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000369253.2 | ABLIM1-010 | 2255 | 401aa | ENSP00000358257.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O14639 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000428430.1 | ABLIM1-011 | 854 | 173aa | ENSP00000400934.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6XFR5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440467.1 | ABLIM1-012 | 541 | 172aa | ENSP00000414154.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y7N6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000392955.3 | ABLIM1-002 | 7400 | 655aa | ENSP00000376682.3 | Nonsense mediated decay | H0Y3K7 | - | - | |
| ENST00000369256.2 | ABLIM1-005 | 3203 | 688aa | ENSP00000358260.2 | Nonsense mediated decay | B3KVH2 Q5T6N2 | - | - | |
| ENST00000477638.1 | ABLIM1-007 | 356 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481974.1 | ABLIM1-006 | 518 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485570.1 | ABLIM1-013 | 498 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466400.1 | ABLIM1-014 | 448 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
