Transcript: ENST00000369266.3 ABLIM1-202

Description

actin binding LIM protein 1 [Source:HGNC Symbol;Acc:78]

Gene Synonyms

ABLIM, KIAA0059, LIMAB1, LIMATIN, abLIM-1, limatin

Location

Chromosome 10: 116,190,872-116,286,685 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 11 domains and features, is associated with 39097 variant alleles and maps to 642 oligo probes.

Gene

This transcript is a product of gene ENSG00000099204.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000533213.2	ABLIM1-203	7606	718aa	ENSP00000433629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369252.4	ABLIM1-201	7606	718aa	ENSP00000358256.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31288	O14639	NM_001003408.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392952.3	ABLIM1-009	6841	455aa	ENSP00000376679.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31289	O14639	NM_006720.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369266.3	ABLIM1-202	6836	455aa	ENSP00000358270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277895.5	ABLIM1-001	2657	778aa	ENSP00000277895.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7590	O14639	NM_002313.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369253.2	ABLIM1-010	2255	401aa	ENSP00000358257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O14639	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428430.1	ABLIM1-011	854	173aa	ENSP00000400934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6XFR5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440467.1	ABLIM1-012	541	172aa	ENSP00000414154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y7N6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392955.3	ABLIM1-002	7400	655aa	ENSP00000376682.3	Nonsense mediated decay		H0Y3K7	-	-
ENST00000369256.2	ABLIM1-005	3203	688aa	ENSP00000358260.2	Nonsense mediated decay		B3KVH2 Q5T6N2	-	-
ENST00000477638.1	ABLIM1-007	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481974.1	ABLIM1-006	518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485570.1	ABLIM1-013	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466400.1	ABLIM1-014	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 6,836 bps, Translation length: 455 residues

Version

ENST00000369266.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 15.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000369266.3 ABLIM1-202

Summary