Description
solute carrier organic anion transporter family, member 6A1 [Source:HGNC Symbol;Acc:23613]
Gene Synonyms
CT48, GST, MGC26949, OATP-I, OATP6A1, OATPY, SLC21A19
Location
Chromosome 5: 101,707,486-101,834,720 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 10 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000506729.1 | SLCO6A1-001 | 2689 | 719aa | ENSP00000421339.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34206 | D3DSZ4 H0Y8R6 Q86UG4 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000379807.3 | SLCO6A1-002 | 2437 | 719aa | ENSP00000369135.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34206 | D3DSZ4 H0Y8R6 Q86UG4 | NM_173488.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000389019.3 | SLCO6A1-003 | 2340 | 657aa | ENSP00000373671.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3DSZ4 H0Y8R6 Q86UG4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000379810.1 | SLCO6A1-201 | 1762 | 466aa | ENSP00000369138.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J020 H0Y8R6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000513675.1 | SLCO6A1-004 | 1611 | 466aa | ENSP00000421990.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J020 H0Y8R6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000511588.1 | SLCO6A1-005 | 432 | 25aa | ENSP00000421846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y8R6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000514551.1 | SLCO6A1-007 | 827 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505407.1 | SLCO6A1-008 | 669 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514765.2 | SLCO6A1-006 | 672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000505739.1 | SLCO6A1-009 | 450 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
