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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMEM52 ENSG00000178821

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Description

transmembrane protein 52 [Source:HGNC Symbol;Acc:27916]

Location

Chromosome 1: 1,849,029-1,850,712 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310991.3	TMEM52-001	929	209aa	ENSP00000311122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35	Q8NDY8 R4GMU3	NM_178545.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378602.3	TMEM52-004	1118	194aa	ENSP00000367865.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NDY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378598.4	TMEM52-005	483	124aa	ENSP00000367861.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416272.1	TMEM52-002	313	103aa	ENSP00000409669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470931.2	TMEM52-003	690	43aa	ENSP00000473350.1	Nonsense mediated decay		R4GMU3	-	-
ENST00000602604.1	TMEM52-006	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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