Transcript: ENST00000602604.1 TMEM52-006

Description

transmembrane protein 52 [Source:HGNC Symbol;Acc:27916]

Location

About this transcript

This transcript has 4 exons, is associated with 878 variant alleles and maps to 337 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378602.3	TMEM52-004	1118	194aa	ENSP00000367865.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NDY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310991.3	TMEM52-001	929	209aa	ENSP00000311122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35	Q8NDY8 R4GMU3	NM_178545.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378598.4	TMEM52-005	483	124aa	ENSP00000367861.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416272.1	TMEM52-002	313	103aa	ENSP00000409669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470931.2	TMEM52-003	690	43aa	ENSP00000473350.1	Nonsense mediated decay		R4GMU3	-	-
ENST00000602604.1	TMEM52-006	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 878 bps,

Version

ENST00000602604.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467499 (version 1)