Transcript: ENST00000378602.3 TMEM52-004

Description

transmembrane protein 52 [Source:HGNC Symbol;Acc:27916]

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 801 variant alleles and maps to 320 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378602.3	TMEM52-004	1118	194aa	ENSP00000367865.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NDY8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310991.3	TMEM52-001	929	209aa	ENSP00000311122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35	Q8NDY8 R4GMU3	NM_178545.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378598.4	TMEM52-005	483	124aa	ENSP00000367861.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416272.1	TMEM52-002	313	103aa	ENSP00000409669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AKR3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470931.2	TMEM52-003	690	43aa	ENSP00000473350.1	Nonsense mediated decay		R4GMU3	-	-
ENST00000602604.1	TMEM52-006	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,118 bps, Translation length: 194 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NDY8

Version

ENST00000378602.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000002784 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.