Description
sodium channel, voltage-gated, type III, alpha subunit [Source:HGNC Symbol;Acc:10590]
Gene Synonyms
KIAA1356, NAC3, Nav1.3
Location
Chromosome 2: 165,944,032-166,060,577 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 9 transcripts (splice variants), 16 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000283254.7 | SCN3A-001 | 9091 | 2000aa | ENSP00000283254.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33312 | C9JBM7 F5H4V8 Q9NY46 | NM_006922.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000360093.3 | SCN3A-201 | 9123 | 2000aa | ENSP00000353206.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBM7 F5H4V8 Q9GZM4 Q9NY46 | NM_001081677.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000409101.3 | SCN3A-002 | 6599 | 1951aa | ENSP00000386726.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46440 | C9JBM7 F5H4V8 Q9GZM4 Q9NY46 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000440431.2 | SCN3A-004 | 4146 | 1364aa | ENSP00000403348.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBM7 E7EUE6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540861.1 | SCN3A-202 | 1908 | 483aa | ENSP00000439920.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4V8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000453007.1 | SCN3A-003 | 1216 | 200aa | ENSP00000391569.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBM7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000465043.1 | SCN3A-007 | 531 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000484898.1 | SCN3A-008 | 262 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471697.1 | SCN3A-006 | 555 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
