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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGA9 ENSG00000144668

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Description

integrin, alpha 9 [Source:HGNC Symbol;Acc:6145]

Gene Synonyms

ALPHA-RLC, ITGA4L, RLC

Location

Chromosome 3: 37,493,606-37,865,005 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 4 transcripts (splice variants) and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264741.5	ITGA9-001	7889	1035aa	ENSP00000264741.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2669	Q13797	NM_002207.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422441.1	ITGA9-002	2282	632aa	ENSP00000397258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDS3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411817.2	ITGA9-004	609	69aa	ENSP00000406533.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461533.1	ITGA9-003	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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