Description
interferon regulatory factor 8 [Source:HGNC Symbol;Acc:5358]
Gene Synonyms
H-ICSBP, ICSBP, ICSBP1, IRF-8
Location
Chromosome 16: 85,932,409-85,956,215 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 11 transcripts (splice variants), 8 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000268638.5 | IRF8-001 | 3030 | 426aa | ENSP00000268638.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10956 | H3BPS5 H3BQH6 H3BQK3 H3BRT4 H3BT31 Q02556 | NM_002163.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000566369.1 | IRF8-003 | 1582 | 152aa | ENSP00000455048.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000563180.1 | IRF8-002 | 1394 | 126aa | ENSP00000458047.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQK3 H3BVC2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000564803.1 | IRF8-006 | 1038 | 328aa | ENSP00000456992.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQH6 H3BQK3 H3BT31 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562492.1 | IRF8-009 | 946 | 222aa | ENSP00000455452.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPS5 H3BRT4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000569607.1 | IRF8-010 | 880 | 220aa | ENSP00000456395.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRT4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564617.1 | IRF8-011 | 531 | 159aa | ENSP00000455784.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQH6 H3BQK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565552.1 | IRF8-004 | 522 | 47aa | ENSP00000455816.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQK3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569145.1 | IRF8-008 | 289 | 14aa | ENSP00000455760.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570088.1 | IRF8-005 | 553 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000564056.1 | IRF8-007 | 514 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
