Description
retinoic acid receptor, alpha [Source:HGNC Symbol;Acc:9864]
Gene Synonyms
NR1B1, RAR
Location
Chromosome 17: 38,465,444-38,513,094 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 10 transcripts (splice variants), 18 paralogues and is associated with 62 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000254066.5 | RARA-001 | 2414 | 462aa | ENSP00000254066.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11366 | J3KSJ4 J3QRM2 P10276 Q6I9R7 | NM_000964.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394081.3 | RARA-004 | 2285 | 457aa | ENSP00000377643.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42317 | F1D8N9 J3KSJ4 P10276 | NM_001024809.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000425707.3 | RARA-007 | 2240 | 365aa | ENSP00000389993.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45671 | P10276 | NM_001145302.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394089.2 | RARA-002 | 2024 | 462aa | ENSP00000377649.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11366 | J3KSJ4 J3QRM2 P10276 Q6I9R7 | NM_001145301.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394086.3 | RARA-003 | 2008 | 478aa | ENSP00000377648.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MUP8 J3KSJ4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000475125.1 | RARA-005 | 813 | 186aa | ENSP00000462514.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577646.1 | RARA-008 | 733 | 66aa | ENSP00000464287.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420042.1 | RARA-006 | 1052 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582914.1 | RARA-009 | 581 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579727.1 | RARA-010 | 564 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
