Transcript: ENST00000582914.1 RARA-009

Description

retinoic acid receptor, alpha [Source:HGNC Symbol;Acc:9864]

Gene Synonyms

NR1B1, RAR

Location

Chromosome 17: 38,479,243-38,487,420 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3184 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSG00000131759.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254066.5	RARA-001	2414	462aa	ENSP00000254066.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11366	J3KSJ4 J3QRM2 P10276 Q6I9R7	NM_000964.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394081.3	RARA-004	2285	457aa	ENSP00000377643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42317	F1D8N9 J3KSJ4 P10276	NM_001024809.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425707.3	RARA-007	2240	365aa	ENSP00000389993.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45671	P10276	NM_001145302.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394089.2	RARA-002	2024	462aa	ENSP00000377649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11366	J3KSJ4 J3QRM2 P10276 Q6I9R7	NM_001145301.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394086.3	RARA-003	2008	478aa	ENSP00000377648.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUP8 J3KSJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475125.1	RARA-005	813	186aa	ENSP00000462514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSJ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000577646.1	RARA-008	733	66aa	ENSP00000464287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420042.1	RARA-006	1052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582914.1	RARA-009	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579727.1	RARA-010	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 581 bps,

Version

ENST00000582914.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000447444 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000582914.1 RARA-009

Summary