Description
collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025]
Gene Synonyms
COL1AL, COLA1L, dJ682J15.1, dJ708F5.1
Location
Chromosome 6: 55,921,388-56,258,892 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 13 transcripts (splice variants) and 9 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000244728.5 | COL21A1-001 | 4339 | 957aa | ENSP00000244728.5 | Protein coding | CCDS55025 | A6PVD9 Q96P44 | NM_030820.3 | Ensembl Canonical, GENCODE basic, |
ENST00000535941.1 | COL21A1-202 | 4172 | 957aa | ENSP00000444384.1 | Protein coding | A6PVD9 F5GZK2 | - | GENCODE basic, | |
ENST00000370819.1 | COL21A1-002 | 4094 | 954aa | ENSP00000359855.1 | Protein coding | A6PVD9 Q96P44 | - | GENCODE basic, | |
ENST00000370808.2 | COL21A1-201 | 2038 | 323aa | ENSP00000359844.2 | Protein coding | Q96P44 | - | GENCODE basic, | |
ENST00000370817.3 | COL21A1-005 | 624 | 136aa | ENSP00000359853.3 | Protein coding | A6PVD9 | - | CDS 3' incomplete, | |
ENST00000456983.1 | COL21A1-003 | 480 | 125aa | ENSP00000390958.1 | Protein coding | - | - | CDS 5' incomplete, | |
ENST00000488912.1 | COL21A1-010 | 2327 | 79aa | ENSP00000433624.1 | Nonsense mediated decay | H0YDH6 | - | CDS 5' incomplete, | |
ENST00000467045.1 | COL21A1-006 | 2291 | No protein | - | Processed transcript | - | - | - | |
ENST00000469682.1 | COL21A1-007 | 778 | No protein | - | Processed transcript | - | - | - | |
ENST00000484987.1 | COL21A1-008 | 598 | No protein | - | Processed transcript | - | - | - | |
ENST00000467216.2 | COL21A1-009 | 277 | No protein | - | Processed transcript | - | - | - | |
ENST00000482933.1 | COL21A1-011 | 1413 | No protein | - | Retained intron | - | - | - | |
ENST00000461489.1 | COL21A1-004 | 555 | No protein | - | Retained intron | - | - | - |