Description
collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025]
Gene Synonyms
COL1AL, COLA1L, dJ682J15.1, dJ708F5.1
Location
Chromosome 6: 55,921,389-55,956,459 reverse strand.
About this transcript
This transcript has 14 exons, is associated with 14807 variant alleles and maps to 440 oligo probes.
Gene
This transcript is a product of gene ENSG00000124749.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000244728.5 | COL21A1-001 | 4339 | 957aa | ENSP00000244728.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55025 | A6PVD9 Q96P44 | NM_030820.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000535941.1 | COL21A1-202 | 4172 | 957aa | ENSP00000444384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVD9 F5GZK2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000370819.1 | COL21A1-002 | 4094 | 954aa | ENSP00000359855.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVD9 Q96P44 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000370808.2 | COL21A1-201 | 2038 | 323aa | ENSP00000359844.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q96P44 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000370817.3 | COL21A1-005 | 624 | 136aa | ENSP00000359853.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVD9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000456983.1 | COL21A1-003 | 480 | 125aa | ENSP00000390958.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000488912.1 | COL21A1-010 | 2327 | 79aa | ENSP00000433624.1 | Nonsense mediated decay | H0YDH6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000467045.1 | COL21A1-006 | 2291 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469682.1 | COL21A1-007 | 778 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000484987.1 | COL21A1-008 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467216.2 | COL21A1-009 | 277 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482933.1 | COL21A1-011 | 1413 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461489.1 | COL21A1-004 | 555 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |