Description
peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:8857]
Gene Synonyms
PBD8A, PBD8B
Location
Chromosome 11: 45,931,220-45,940,363 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 11 transcripts (splice variants) and is associated with 8 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000241041.3 | PEX16-002 | 1479 | 346aa | ENSP00000241041.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7917 | E9PLS4 Q9Y5Y5 | NM_057174.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000532681.1 | PEX16-003 | 1639 | 241aa | ENSP00000434654.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLS4 E9PP98 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000378750.5 | PEX16-001 | 1335 | 336aa | ENSP00000368024.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31472 | E9PLS4 E9PP98 Q9Y5Y5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000525192.1 | PEX16-006 | 903 | 160aa | ENSP00000431309.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533151.1 | PEX16-007 | 563 | 183aa | ENSP00000433045.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMM3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000528674.1 | PEX16-004 | 795 | 64aa | ENSP00000434060.1 | Nonsense mediated decay | E9PSC6 | - | - | |
| ENST00000529030.1 | PEX16-005 | 794 | 60aa | ENSP00000432486.1 | Nonsense mediated decay | E9PQW0 | - | - | |
| ENST00000525229.1 | PEX16-008 | 588 | 52aa | ENSP00000431132.1 | Nonsense mediated decay | E9PMS3 | - | - | |
| ENST00000532554.1 | PEX16-011 | 546 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523721.2 | PEX16-010 | 325 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527371.1 | PEX16-009 | 362 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
