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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCD1 ENSG00000106246

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Description

pentatricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:22198]

Gene Synonyms

KIAA0632

Location

Chromosome 7: 99,014,362-99,063,787 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 6 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555673.1	PTCD1-201	2491	749aa	ENSP00000450995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56496	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 G3V325	NM_001198879.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292478.4	PTCD1-001	5582	700aa	ENSP00000292478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34691	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 O75127	NM_015545.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430982.1	PTCD1-007	571	164aa	ENSP00000390530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JGL8 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430029.1	PTCD1-004	556	144aa	ENSP00000408059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419981.1	PTCD1-002	533	106aa	ENSP00000401600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485746.1	PTCD1-005	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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