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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MSH2 ENSG00000095002

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Description

mutS homolog 2 [Source:HGNC Symbol;Acc:7325]

Gene Synonyms

COCA1, FCC1, HNPCC, HNPCC1, LCFS2

Location

Chromosome 2: 47,630,108-47,789,450 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 6 transcripts (splice variants) and is associated with 88 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000233146.2	MSH2-001	3307	934aa	ENSP00000233146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1834	B4DL39 C9J809 P43246 Q53RU4	NM_000251.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406134.1	MSH2-002	3628	921aa	ENSP00000384199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J809 E9PHA6 Q53RU4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543555.1	MSH2-201	3018	868aa	ENSP00000442697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58709	B4DL39 C9J809 P43246	NM_001258281.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454849.1	MSH2-003	560	140aa	ENSP00000411482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J809	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461394.1	MSH2-005	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467323.1	MSH2-006	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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