Description
tetraspanin 17 [Source:HGNC Symbol;Acc:13594]
Gene Synonyms
FBX23, FBXO23, TM4SF17
Location
Chromosome 5: 176,074,388-176,086,058 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 10 transcripts (splice variants), 175 orthologues and 32 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000310032.8 | TSPAN17-001 | 2550 | 332aa | ENSP00000309036.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34298 | J3KNG2 | NM_130465.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000298564.10 | TSPAN17-009 | 2810 | 188aa | ENSP00000298564.10 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q96FV3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000405525.2 | TSPAN17-201 | 2555 | 266aa | ENSP00000385665.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J7R4 | NM_001006616.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000508164.1 | TSPAN17-003 | 2457 | 329aa | ENSP00000422053.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54952 | Q96FV3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000515708.1 | TSPAN17-002 | 2361 | 263aa | ENSP00000426650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47346 | Q96FV3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000503045.1 | TSPAN17-008 | 1019 | 309aa | ENSP00000425212.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RDX8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000504168.1 | TSPAN17-007 | 884 | 257aa | ENSP00000423957.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RBW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507471.1 | TSPAN17-006 | 707 | 203aa | ENSP00000423610.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000503030.1 | TSPAN17-005 | 909 | 58aa | ENSP00000425975.1 | Nonsense mediated decay | D6RI03 | - | - | |
| ENST00000514705.1 | TSPAN17-004 | 4445 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
