Transcript: ENST00000503045.1 TSPAN17-008

Description

tetraspanin 17 [Source:HGNC Symbol;Acc:13594]

Gene Synonyms

FBX23, FBXO23, TM4SF17

Location

Chromosome 5: 176,074,562-176,084,733 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 5014 variant alleles and maps to 287 oligo probes.

Gene

This transcript is a product of gene ENSG00000048140.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298564.10	TSPAN17-009	2810	188aa	ENSP00000298564.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96FV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405525.2	TSPAN17-201	2555	266aa	ENSP00000385665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7R4	NM_001006616.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310032.8	TSPAN17-001	2550	332aa	ENSP00000309036.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34298	J3KNG2	NM_130465.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508164.1	TSPAN17-003	2457	329aa	ENSP00000422053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54952	Q96FV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515708.1	TSPAN17-002	2361	263aa	ENSP00000426650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47346	Q96FV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503045.1	TSPAN17-008	1019	309aa	ENSP00000425212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504168.1	TSPAN17-007	884	257aa	ENSP00000423957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBW9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507471.1	TSPAN17-006	707	203aa	ENSP00000423610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503030.1	TSPAN17-005	909	58aa	ENSP00000425975.1	Nonsense mediated decay		D6RI03	-	-
ENST00000514705.1	TSPAN17-004	4445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,019 bps, Translation length: 309 residues

Version

ENST00000503045.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372215 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000503045.1 TSPAN17-008

Summary