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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYPL1 ENSG00000008282

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Description

synaptophysin-like 1 [Source:HGNC Symbol;Acc:11507]

Gene Synonyms

H-SP1, SYPL

Location

Chromosome 7: 105,730,949-105,753,022 reverse strand.

GRCh37:CM000669.1

About this gene

This gene has 6 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000011473.2	SYPL1-001	2127	259aa	ENSP00000011473.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5736	A4D0R1 A4D0R2 Q16563	NM_006754.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455385.2	SYPL1-002	2151	241aa	ENSP00000388336.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47685	A4D0R2 Q16563	NM_182715.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470347.1	SYPL1-004	1193	224aa	ENSP00000419070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYN0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464029.1	SYPL1-005	1017	148aa	ENSP00000417473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460770.1	SYPL1-007	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483448.1	SYPL1-003	478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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