Transcript: ENST00000588303.1 BCAM-004

Description

basal cell adhesion molecule (Lutheran blood group) [Source:HGNC Symbol;Acc:6722]

Gene Synonyms

AU, CD239, LU, MSK19

Location

Chromosome 19: 45,312,372-45,315,303 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1394 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000187244.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000589651.1	BCAM-002	2686	588aa	ENSP00000476710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42575	A9YWT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000270233.6	BCAM-001	2402	628aa	ENSP00000270233.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12644	A9YWT4 P50895	NM_005581.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591520.1	BCAM-006	878	291aa	ENSP00000467100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590196.1	BCAM-005	518	61aa	ENSP00000468189.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590624.1	BCAM-011	991	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588303.1	BCAM-004	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588603.1	BCAM-007	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588714.1	BCAM-010	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589558.1	BCAM-009	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590108.1	BCAM-008	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 914 bps,

Version

ENST00000588303.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453222 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000588303.1 BCAM-004

Summary