Transcript: ENST00000548069.1 FGD6-006

Description

FYVE, RhoGEF and PH domain containing 6 [Source:HGNC Symbol;Acc:21740]

Gene Synonyms

FLJ11183, KIAA1362, ZFYVE24

Location

Chromosome 12: 95,474,946-95,485,563 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 4659 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000180263.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343958.4	FGD6-001	9288	1430aa	ENSP00000344446.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31878	F8VY01 Q6ZV73	NM_018351.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546711.1	FGD6-004	4568	1374aa	ENSP00000450342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VY01 Q6ZV73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549499.1	FGD6-002	3757	1206aa	ENSP00000449005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VY01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551521.1	FGD6-005	904	279aa	ENSP00000450240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548069.1	FGD6-006	725	133aa	ENSP00000448350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451107.3	FGD6-003	2232	59aa	ENSP00000408291.3	Nonsense mediated decay		F8VWT6	-	-
ENST00000550368.1	FGD6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 725 bps, Translation length: 133 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000548069.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407601 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000548069.1 FGD6-006

Summary