Transcript: ENST00000343958.4 FGD6-001

Description

FYVE, RhoGEF and PH domain containing 6 [Source:HGNC Symbol;Acc:21740]

Gene Synonyms

FLJ11183, KIAA1362, ZFYVE24

Location

Chromosome 12: 95,470,525-95,611,240 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 28 domains and features, is associated with 61662 variant alleles and maps to 793 oligo probes.

Gene

This transcript is a product of gene ENSG00000180263.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343958.4	FGD6-001	9288	1430aa	ENSP00000344446.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31878	F8VY01 Q6ZV73	NM_018351.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546711.1	FGD6-004	4568	1374aa	ENSP00000450342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VY01 Q6ZV73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549499.1	FGD6-002	3757	1206aa	ENSP00000449005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VY01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551521.1	FGD6-005	904	279aa	ENSP00000450240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548069.1	FGD6-006	725	133aa	ENSP00000448350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451107.3	FGD6-003	2232	59aa	ENSP00000408291.3	Nonsense mediated decay		F8VWT6	-	-
ENST00000550368.1	FGD6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 9,288 bps, Translation length: 1,430 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZV73

CCDS

This transcript is a member of the Human CCDS set: CCDS31878

Version

ENST00000343958.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000407600 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000343958.4 FGD6-001

Summary