Transcript: ENST00000409884.1 LRRTM4-004

Description

leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:19411]

Gene Synonyms

FLJ12568

Location

Chromosome 2: 76,975,679-77,749,399 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 35 domains and features, is associated with 412381 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000176204.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409088.3	LRRTM4-002	3616	518aa	ENSP00000386236.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46347	C9JM64 Q86VH4 Q9H9T0	NM_024993.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409911.1	LRRTM4-005	2976	591aa	ENSP00000387228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ84 C9JM64	NM_001282924.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409282.1	LRRTM4-003	2451	519aa	ENSP00000386286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM64 Q4KMX1 Q9H9T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409093.1	LRRTM4-001	2247	590aa	ENSP00000386357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46346	C9JM64 Q86VH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409884.1	LRRTM4-004	2227	590aa	ENSP00000387297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46346	C9JM64 Q86VH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456154.1	LRRTM4-006	485	24aa	ENSP00000408722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM64	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491242.1	LRRTM4-007	596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,227 bps, Translation length: 590 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VH4

CCDS

This transcript is a member of the Human CCDS set: CCDS46346

Version

ENST00000409884.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000328228 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409884.1 LRRTM4-004

Summary