Transcript: ENST00000409093.1 LRRTM4-001

Description

leucine rich repeat transmembrane neuronal 4 [Source:HGNC Symbol;Acc:19411]

Gene Synonyms

FLJ12568

Location

Chromosome 2: 76,975,684-77,749,494 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 35 domains and features, is associated with 412413 variant alleles and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000176204.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409088.3	LRRTM4-002	3616	518aa	ENSP00000386236.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46347	C9JM64 Q86VH4 Q9H9T0	NM_024993.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409911.1	LRRTM4-005	2976	591aa	ENSP00000387228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ84 C9JM64	NM_001282924.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409282.1	LRRTM4-003	2451	519aa	ENSP00000386286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM64 Q4KMX1 Q9H9T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409093.1	LRRTM4-001	2247	590aa	ENSP00000386357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46346	C9JM64 Q86VH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409884.1	LRRTM4-004	2227	590aa	ENSP00000387297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46346	C9JM64 Q86VH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456154.1	LRRTM4-006	485	24aa	ENSP00000408722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM64	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491242.1	LRRTM4-007	596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,247 bps, Translation length: 590 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86VH4

CCDS

This transcript is a member of the Human CCDS set: CCDS46346

Version

ENST00000409093.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328225 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409093.1 LRRTM4-001

Summary