Transcript: ENST00000334274.4 TCP11L1-001

Description

t-complex 11, testis-specific-like 1 [Source:HGNC Symbol;Acc:25655]

Gene Synonyms

FLJ11336, dJ85M6.3

Location

Chromosome 11: 33,060,963-33,095,109 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 4 domains and features, is associated with 14813 variant alleles and maps to 491 oligo probes.

Gene

This transcript is a product of gene ENSG00000176148.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334274.4	TCP11L1-001	2817	509aa	ENSP00000335595.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7882	E9PP52 E9PS88 Q9NUJ3 R4GNF5	NM_018393.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432887.1	TCP11L1-202	2633	509aa	ENSP00000395070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7882	E9PP52 E9PS88 Q9NUJ3 R4GNF5	NM_001145541.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531632.2	TCP11L1-010	1898	509aa	ENSP00000433067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7882	E9PP52 E9PS88 Q9NUJ3 R4GNF5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324357.9	TCP11L1-201	1572	374aa	ENSP00000316279.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EN41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530419.1	TCP11L1-007	905	144aa	ENSP00000436428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP52 E9PS88 R4GNF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000602733.1	TCP11L1-003	747	106aa	ENSP00000473628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS88 R4GNF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528962.1	TCP11L1-005	711	158aa	ENSP00000436471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528898.1	TCP11L1-008	547	54aa	ENSP00000435870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS88	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528107.1	TCP11L1-002	3390	154aa	ENSP00000431200.1	Nonsense mediated decay		E9PMB0 E9PS88	-	-
ENST00000527661.1	TCP11L1-004	2468	595aa	ENSP00000435667.1	Nonsense mediated decay		E7EN41 E9PJ55 E9PP52 E9PS88 R4GNF5	-	-
ENST00000530171.1	TCP11L1-009	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532687.1	TCP11L1-006	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,817 bps, Translation length: 509 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NUJ3

CCDS

This transcript is a member of the Human CCDS set: CCDS7882

Version

ENST00000334274.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383377 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000334274.4 TCP11L1-001

Summary