Transcript: ENST00000577185.1 TTC39C-011

Description

tetratricopeptide repeat domain 39C [Source:HGNC Symbol;Acc:26595]

Gene Synonyms

C18orf17, FLJ33761, HsT2697

Location

Chromosome 18: 21,596,598-21,600,249 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1443 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000168234.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540918.2	TTC39C-006	4117	276aa	ENSP00000443016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1P2 J3QKX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317571.3	TTC39C-001	2442	583aa	ENSP00000323645.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45839	J3QKX7 Q8N584	NM_001135993.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304621.6	TTC39C-002	2304	522aa	ENSP00000306598.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32804	J3QKX7 Q8N584	NM_153211.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584250.1	TTC39C-004	1048	76aa	ENSP00000464344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58616	Q8N584	NM_001243425.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577185.1	TTC39C-011	533	43aa	ENSP00000463610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579214.1	TTC39C-007	389	67aa	ENSP00000463283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QKX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000578150.1	TTC39C-003	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584424.1	TTC39C-005	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584095.1	TTC39C-010	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581394.1	TTC39C-009	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 533 bps, Translation length: 43 residues

Version

ENST00000577185.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446216 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000577185.1 TTC39C-011

Summary