Transcript: ENST00000420342.1 CELF3-003

Description

CUGBP, Elav-like family member 3 [Source:HGNC Symbol;Acc:11967]

Gene Synonyms

BRUNOL1, CAGH4, ERDA4, MGC57297, TNRC4

Location

Chromosome 1: 151,674,891-151,689,274 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 6756 variant alleles and maps to 611 oligo probes.

Gene

This transcript is a product of gene ENSG00000159409.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290583.4	CELF3-001	3246	465aa	ENSP00000290583.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1002	Q5SZQ8 Q8IZ97	NM_007185.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420342.1	CELF3-003	2444	466aa	ENSP00000402503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000290585.4	CELF3-002	2335	415aa	ENSP00000290585.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53367	Q5SZQ8 Q8IZ97	NM_001172649.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392706.3	CELF3-201	1330	260aa	ENSP00000376470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQL3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470688.1	CELF3-004	2970	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478829.1	CELF3-007	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479893.1	CELF3-005	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000419910.2	CELF3-006	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,444 bps, Translation length: 466 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000420342.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000036665 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000420342.1 CELF3-003

Summary